Lista de recursos estudada na disciplina de Bioinformática - Base de dados: NCBI (National Center for Biotechnology Information): https://www.ncbi.nlm.nih.gov/ Uniprot (Universal Protein Resource): https://www.uniprot.org/ Para acessar o Swiss-Prot, clique sobre o ícone deste banco de dados ou então acesse diretamente por <https://www.uniprot.org/uniprot/?query=reviewed:yes> KEGG (Kyoto Encyclopedia of Genes and Genomes): https://www.genome.jp/kegg/ Para acessar o Kegg Enzyme, clique sobre o ícone, que está na sessão “data-oriented entry points, ou então acesse diretamente por <https://www.genome.jp/kegg/annotation/enzyme.html> GO (Gene Ontology Consortium): http://www.geneontology.org/ - Alinhamento BLAST (Basic Local Alignment Search Tool): https://blast.ncbi.nlm.nih.gov/Blast.cgi Clustal Omega: https://www.ebi.ac.uk/Tools/msa/clustalo/ MEGA – instalado no seu computador - Mapa de restrição de DNA Rebase (Restriction Enzymne Database): http://tools.neb.com/REBsites/index.php NebCutter (New England BioLabs): http://tools.neb.com/NEBcutter2/ WebCutter: http://heimanlab.com/cut2.html TACG Restriction Mapping: http://biotools.umassmed.edu/tacg4/ - Parâmetros de sequências de nucleotídeos Genomatix: http://www.genomatix.de/cgi-bin/tools/tools.pl Repeat Masker: http://www.repeatmasker.org/cgi-bin/WEBRepeatMasker Gramene: http://www.gramene.org/db/markers/ssrtool - Desenho de primer Primer3 Plus: http://primer3plus.com/cgi-bin/dev/primer3plus.cgi Oligo Analyzer: https://www.idtdna.com/calc/analyzer Oligo Calc: http://www.basic.northwestern.edu/biotools/oligocalc.html - Parâmetros de sequências de aminoácidos TagIdent (ExPASy): http://ca.expasy.org/tools/tagident.html ProtParam (ExPASy): http://ca.expasy.org/tools/protparam.html ProtScale (ExPASy): https://web.expasy.org/protscale/ Physico-chemical Profiles (PRABI): https://npsa-prabi.ibcp.fr/cgibin/npsa_automat.pl?page=npsa_pcprof.html JaMBW (Java-based Molecular Biologist’s Workbench): http://www.bioinformatics.org/JaMBW/3/1/7/ DisProt: http://www.disprot.org/ RONN: https://www.strubi.ox.ac.uk/RONN DisEMBL: http://dis.embl.de/ - Mapa de restrição de proteína Peptide Cutter: http://ca.expasy.org/tools/peptidecutter/ - Predição de estruturas, sítios ativos e domínios Sosui: http://harrier.nagahama-i-bio.ac.jp/sosui/sosui_submit.html Split: http://split.pmfst.hr/split/4/ Octopus: http://octopus.cbr.su.se/ Phobius: http://phobius.sbc.su.se/ Rhythm: http://proteinformatics.charite.de/rhythm/index.php?site=helix TMMOD: http://liao.cis.udel.edu/website/servers/TMMOD/scripts/frame.php?p=submit TMHMM: http://www.cbs.dtu.dk/services/TMHMM/ Coiled-Coil Prediction (PRABI): https://npsa-prabi.ibcp.fr/cgibin/npsa_automat.pl?page=npsa_lupas.html Coils (ExPASy): https://embnet.vital-it.ch/software/COILS_form.html PairCoil2: http://cb.csail.mit.edu/cb/paircoil2/paircoil2.html MarCoil: https://bcf.isb-sib.ch/webmarcoil/webmarcoilC1.html 2-ZIP Server: http://2zip.molgen.mpg.de/index.html Helix-Turn-Helix Motif Prediction (PRABI): https://npsa-prabi.ibcp.fr/cgibin/npsa_automat.pl?page=npsa_hth.html Quick2D: https://toolkit.tuebingen.mpg.de/#/tools/quick2d ProScan (PRABI): https://npsa-prabi.ibcp.fr/cgi-bin/npsa_automat.pl?page=/NPSA/npsa_proscan.html SoftBerry: http://www.softberry.com/berry.phtml?topic=protcomp&group=help&subgroup=proloc