National Institute of Science and Technology – Genetic and Health Information of Brazilian Animal Production Area of research: Research on production, genetic and health potential of Brazilian Animal Production Home Institution: Federal University of Minas Gerais - UFMG Veterinary School Structure of work groups Institute Organizing Committee Coordenator: Rômulo Cerqueira Leite – Professor/researcher - UFMG Vice-coordenator: Concepta Margaret McManus - Professor/researcher - UNB Executive Secretary: Janaína de Paula Coelho Adjunct Secretary: Marc Henry - Professor/researcher - UFMG Adjunct Secretary: Denise Aparecida Andrade de Oliveira - Professor/researcher - UFMG Area Coordinators Health and residues: Romário Cerqueira Leite - UFMG Geomapping: João Paulo Haddad - UFMG Genetics: Denise Aparecida Andrade de Oliveira - UFMG Continuing education: Helder Louvandini - UNB Public policies: Hélio Vilela Barbosa Júnior - MAPA Sub-coordinators of areas: Parasites: Romário Cerqueira Leite - UFMG Aquatic organisms: Ana Cláudia Pinto Cottorelllo – LANAGRO - MG Illnesses : Cristiano Barros de Melo - UNB Health and residues in poultry : Nelson Rodrigues da Silva Martins - UFMG Molecular genetics: Denise Aparecida Andrade de Oliveira - UFMG Genetic moddelling : Concepta Margareth McManus Pimentel - UNB Quantitative genetcs : Martinho de Almeida e Silva - UFMG Reproduction genetics: Vera Fernanda Martins Hossepian de Lima – UNESP - Jaboticabal Geomapping Land animals : João Paulo Haddad – UFMG Geomapping aquatic animals : Daniel Crepaldi – IBAMA Finance Committee: Coordination: Marc Henry - UFMG; Members: Denise Aparecida Andrade de Oliveira – UFMG; João Paulo Haddad – UFMG; Romário Cerqueira Leite – UFMG. Scientific Committee Coordination: Concepta Margaret McManus Pimentel – UNB; Members: Andrea Micke Moreno- USP; Otávio Mitio Ohashi – UFPA; Nelson Rodrigo da Silva Martins – UFMG; Josiane Tavares de Abreu – PUC - MG Main research topics The institute´s main objective is create and maintain an up-to-date data bank of information which characterizes Brazilian animal production. The aim is to create a network of laboratories in national territory which together develop, innovate and execute methods and means to maintain and make available information which characterize diverse systems of production of animals of economic interest. As such, the INCT is working in the following areas: Characterization of geographic distribution of different production systems, genetic characterization of species and breeds, studies on prevalence and spatial distribution of infectious and parasite diseases. Molecular genotyping for characterization of reference strains will be carried out as well as processes for genetic certification of products of animal origin, selection assisted by markers and animal genetic forensics. Summary of results obtained The network of laboratories which support the INCT is being expanded. The studies began with the geographical characterization of animal production systems. The municipal index of beef cattle production development and aquatic organisms is in final phase of processing. Data on swine and dairy cattle production are being developed. Thereafter the indices for poultry, sheep, goats, buffaloes and horses as well as other systems will be developed. Together with these indices, another front is collecting and cataloging all available information on the incidence and prevalence of infectious diseases in Brazil as well as genetic characterization of species of interest. The genetic characterization of some breeds of sheep, goats and horses has been carried out where along with genetic evaluations, heat and parasite tolerance was characterized. The results of geomapping of production systems will lead the way for new studies. The genetic identification (barcode) of fish in the São Francisco river basin, is also underway with 107 species already identified and another 143 in analysis. Genetic tests were developed to detect fraud in milk products of buffalo origin. The INCT also developed techniques for genetic identification of several fish species in natura, filleted and in posts for fraud detection. The continuous actualization of the information bank is the challenge for the INCT Genetic and Health Information of Brazilian Animal Production. Production from May 2009 to August 2010 Genetics Health Geo processing Total Publications Articles published in national journals 24 23 25 21 Articles published in international journals Studies presented in national congresses Studies presented in international congresses Formation of Human resources Finished Scientific Initiation Masters Doctors Post-doctor Others 1 3 1 1 4 11 5 3 1 4 15 9 1 1 On going Scientific Initiation Masters Doctors 6 4 7 Post-doctor 9 9 6 3 3 1 1 18 16 14 1 Others INCT Scholarships Scientific Initiation Technical support Junior Postdoctorate DTI 2 DTI 3 8 10 6 1 2 New members Undergraduate Masters Doctors Postdoctorate Researcher Institution 7 12 7 2 21 1 Ongoing research: Genetics: - Genetic dentification (Barcode) of fish from the São Francisco River Basin - Development, Standardization and Implantation of DNA tests for genetic Identification and Confirmation of Genealogies in Buffaloes. - Genetic analysis of strains of Haemonchus contortus in cattle for identification of resistence to benzimidazol. - Development de genetic tests for fraud identification in meat and milk products. - Development of microssatelites for Pirá (Conorhynchus conirostris) fish using pirosequencing technqiue - Technological innovations in the production of tilapia fry: triploids interploids. - Development and use of de animal Genetic resources in Brazil using techniques in the areas of reproduction, breeding, molecular biology, ethology and evaluation of products and subproducts. - Landscape genetics of sheep in Brazil: a georeferenced evaluation of genetic patterns for conservation, characterization and rastreability of herds - Integration of Population viability analyses (PVA) and molecular markers fro conservation of animal genetic resources - Validation of Scrapie susceptibility, prospection of new alleles and evaluation of Brazilian sheep herd - Implications for crosses in hair sheep in production, reproduction and health in females Health: - Isolation and phylogenetic analysis of Brazilian samples of caprine arthritic encephalitis (CAEV). - Detection of infection by swine flu virus in swine in Minas Gerais. - Diagnosis, Epidemiology and Control of illnesses in Poultry. - Rational use of antiparasite medicine and prevention of residues in products of animal origin: evaluation of alternative strategies and conventional methods of parasite control in dairy cattle. - Diagnóstico da resistência interespecífica em Haematobia irritans irritans (Linnaeus, 1758) (Diptera: Muscidae) and Rhipicephalus (Boophilus) microplus (Canestrini, 1887) (Acari: Ixodidae) em decorrência da utilization de ectoparasiticidas em Minas Gerais. - study of Parasitic otitis in Gyr herd in Minas Gerais. Analysis and detection of etiological agents of transnational diseases in products of animal origin in accompanied luggage on international flights in Tom Jobim (Rio de Janeiro) and Franco Montoro (Guarulhos) airports - Study of rabies cases in the Distrito Federal and surroundings in the last 10 years with emphasis on human and cattle rabies - Study of prevalence and risk factors for reproductive diseases in conservation herds of Criuolo Lageano cattle in Brazil. - Infection by Neospora caninum, Toxoplasma gondii and bovine leucose vírus in the Catarinense Crioulo Lageno. - Study of genetic variability of S1 gene of infectious bronchitis in poultry in Minas Gerais - Mapping of antigenic determinants of Brazilian isolates of infectious bronchitis in chickens. - Genotyping using RT-PCR/ RFLP for rapid classification of infectious bronchitis in chickens from clinical outbreak in Brazil between 1972 and 2009, based on S1segment - molecular characterization of Brazilian isolates of infectious bronchitis in chickens - characterization of Brazilian isolates of infectious bronchitis in chickens based of coding segments of S2 and N” - Characterization of isolates of Mycobacterium bovis by conventional and RT PCR - Sequencing of six samples of Aujeszky disease vírus (SuHV-1) from outbreaks in Santa Catarina in 2002 and 2003 - Standardization of genotying methods for Aujeszky disease vírus (SuHV-1) using PCR and restriction by BamHI; - Standardization of PCR technique for detection of contamination of cell culture by torque teno vírus (TTV); - Standardization of PCR technique for detection of contamination of cell culture by swine parvovírus (PPV); - Detection of viral encephalitis by herpesvírus in 48 samples of bovine brain using PCR multiplex. - Standardization of PCR technique for detection of S. aureus and enterotoxins in Milk and Milk products. - Implantation of diagnosis using molecular biology in three marine shrimp viroses, Mancha Branca, Infectious Mionecrose and IHHNV, allowing routine analysis. - Evaluation of loading, transport and unloading cattle for well being - Development and validation of analytical methods for determination and toxicological evaluation of inorganic and chemical substances of vegetal and animal origin - Evaluation of Mitigation of Methane and production in sheep at pasture fed with tanniferous legumes Geoprocessing Current status Beef cattle – finished - in publication Milk cattle – in analysis Swine – in analysis Aquatic Organisms – concluded - in publication Ovines – in analysis - Methods of epidemological investigation: case Study of neosporosis and leptospirosis in dairy cattle in the microregion of Sete Lagoas - Development and validation of a system of simulation of infectious diseases in carrle based on transport - Movement of cattle and definition of collection areas of abattoirs under Federal Insspection service (SIF) in the States of Mato Grosso, Mato Grosso do Sul, Paraná and Santa Catarina Sample bank Genetic material ~ 5000 cattle, ~7800 horses, ~90 dogs, ~400 fish ~200 buffaloes Microrganisms characterized 188 strains of Leptospira 33 strains of Clostridium ~400 agents that cause illnesses in aquatic organisms 75 + 55 strains of Brucellas 50 strains of virus 35 different cell lines Prospection of reports of occurrence of animal diseases of interest in Brazil Status: advanced Name Bacterial diseases Anthrax Enzootic pneumonia Black-leg Botulism Enterotoxaemia Tetanus Bacillary hemoglobinuria Infectious necrotic hepatitis Malignant edema Bovine genital campylobacteriosis Causative agent Bacillus anthracis Mycoplasma hyopneumoniae Clostridium (feseri) chauvaei Clostridium botulinum Clostridium perfringens, Clostridium difficile (Guinea pigs) Clostridium tetani Clostridium haemolyticum (novyi type D) Clostridium novyi type B Clostridium septicum Campylobacter fetus venerealis Bovine Brucellosis (Brucella abortus) Caprine and ovine brucellosis Porcine brucellosis (Brucella suis) Brucellosis (Brucella suis biovar 4) Ovine epididymitis (Brucella ovis) Glanders Leptospirosis Listeriosis Tuberculosis Q-fever Rickettsial diseases Anaplasmosis Bovine petechial fever Ehrlichiosis Heartwater Equine granulocytic ehrlichiosis Viral diseasses Blue tongue Bovine viral diarrhoea virus (BVD) Buffalo pox Classic Swine Fever Enzootic bovine leukosis Equine encephalomyelitis (Eastern) Equine encephalomyelitis (Western) Equine infectious anaemia Foot-and-mouth disease Infectious bovine rhinotracheitis/infectious pustular vulvovaginitis or C fetus fetus Brucella abortus Brucella melitensis Brucella suis Brucella suis biovar 4 Brucella ovis Burkholderia mallei Leptospira spp. Listeria monocytogenes Mycobacterium bovis Coxiella burnetii Anaplasma marginale Ehrlichia ondiri Ehrlichia phagocytophila Ehrlichia (formerly Cowdria) ruminantium Anaplasma phagocytophila Orbivirus Pestivirus Pox vírus Flavivirus Deltaretrovirus Alphavirus Alphavirus Retrovirus (lentivirus) Aphthovirus, family Picornaviridae Bovine herpesvirus 1 IHHNV, Parvovirus Infectious hypodermal and hematopoietic necrosis Infectious Mionecrosis Lumpy skin disease Papillomatosis Rabies Vesicular stomatitis West Nile fever White Spot Internal Parasites (helminths) Cysticercosis (beef tapeworm) IMNV, Totivirus Pox vírus Papillomavirus Lyssavirus vesiculoviroses - family rhabdovirus Arbovirus WSSV, Whispovirus Taenia saginata (Cysticercus Cysticercosis (pork tapeworm) Internal Parasites (protozoa) Babesiosis Coccidiosis Cryptosporidiosis Equine protozoal myeloencephalitis Sarcocistosis Sarcoide (Equine) Toxoplasmosis Trichomoniasis (cattle) Prion diseases Bovine spongiform encephalopathy Chronic wasting disease Scrapie bovis) Taenia solium (Cysticercus cellulosae) Babesia bigemina, B. bovis Eimeria spp. Cryptosporidium species Sarcocystis neurona Sarcocystis cruzi Papillomavirus Toxoplasma gondii Tritrichomonas foetus foetus Prion Prion Prion Courses offered by INCT Atualization of genetic Identification tests and Confirmation of Genealogies. Introduction to SAS Methods of Experimentation in Animal Science Courses taken by members of INCT - Analysis of fragments by capillar electrophorisis - CBAB in molecular biology techniques applied to diagnosis of parasite resistence in helminths of veterinary importance. - sequencing by capillar electrophorisis. - Quantitativ Real Time PCR - Analysis of fragments and sequencing by capillar electrophorisis on an ABI 3130. INCT Key note speeches – n=3 Contacts Telephone: 55 31 3409-2073 E-mail: [email protected] Address: Avenida Antônio Carlos, 6627, Pampulha - Belo Horizonte - Minas Gerais CEP: 30123-970 / Caixa Postal 567 Site: www.animal.unb.br